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Project Descriptions
Spring 2025

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Showing 3 projects out of 3 found. On page 1 out of 1.
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Simulating the 3D conformations of intrinsically disordered transcriptional activation domains

Max Staller - Assistant Researcher, Center for Computational Biology

Status: Full- no new appr needed     Weekly Hours: 9-11 hrs     Location: On Campus

It is now clear that roughly a third of the amino acids in human proteins are intrinsically disordered and do not fold into a single 3D structure. Some of these regions transiently fold when bound to partners, but many simply wiggle between many confirmations. These disordered regions cannot be visualized...

 Biological & Health Sciences

Probing the evolution of transcription factor activation domains

Max Staller - Assistant Researcher, Center for Computational Biology

Status: Full- no new appr needed     Weekly Hours: 9-11 hrs     Location: On Campus

Transcription factors contain DNA binding domains and separate activation domains that bind coactivator complexes. DNA binding domains are conserved, structured and can be predicted from amino acid sequence. Activation domains are intrinsically disordered (they do not fold into a single 3D structure), poorly conserved and cannot be predicted from amino...

 Biological & Health Sciences

Computational approaches to studying patient mutations in transcriptional activation domains

Max Staller - Assistant Researcher, Center for Computational Biology

Status: Full- no new appr needed     Weekly Hours: 12 or more hours     Location: On Campus

Our group has developed simple and highly predictive models for transcriptional activation domains. The goal of the project is to identify human activation domains enriched for patient mutations...

 Biological & Health Sciences

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