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Project Descriptions
Spring 2025

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Showing 46 projects out of 96 found. On page 2 out of 2.
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Archives Apprentice at the Museum of Vertebrate Zoology

Michelle Koo - Staff Curator, Museum of Vertebrate Zoology

Status: Full- no new appr needed     Weekly Hours: to be negotiated     Location: On Campus

The Museum of Vertebrate Zoology (MVZ) is a vibrant research and informatics center for the campus and the natural history communities around the world. The world's natural history museums are responsible for documenting over 1.8 billion species known as a result of 300 years of biological exploration of the planet...

 Biological & Health Sciences   Arts & Humanities   Digital Humanities and Data Science   150 Years of Women at Berkeley

Compiling and data-wrangling the first comprehensive dataset of all security forces in Latin America and the Caribbean

Dorothy Kronick - Professor, Center for Effective Global Action

Status: Current Term Now Closed     Weekly Hours: 6-8 hrs     Location: On Campus

The majority of people in extreme poverty live in conflict-affected or fragile countries, most of which experience primarily internal conflicts, rather than wars with another country. Latin America has experienced a number of recent civil conflicts, as well as notable drug trafficking efforts and crime waves that cause more...

 Social Sciences   Digital Humanities and Data Science

Plant innate immunity in response to bacterial pathogens

Jennifer Lewis - Professor, Plant and Microbial Biology

Status: Current Term Now Closed     Weekly Hours: 9-11 hrs     Location: Off Campus

The plant pathogen Pseudomonas syringae causes disease in a large number of different plant species, using the type III secretion system to secrete and translocate effector proteins into the plant. Many of these effector proteins are believed to function primarily in the suppression of host defense signaling. However recognition of...

 Biological & Health Sciences   Digital Humanities and Data Science

Programming/engineering tools to understand plant-pathogen interactions

Jennifer Lewis - Professor, Plant and Microbial Biology

Status: Check back for status     Weekly Hours: 9-11 hrs     Location: Off Campus

The plant pathogen Pseudomonas syringae causes disease in a large number of different plant species. Virulence is primarily achieved by the type III secretion system, which secretes and translocates effector proteins into the plant. Many of these effector proteins are believed to suppress host defense signaling. However recognition of these...

 Biological & Health Sciences   Digital Humanities and Data Science

The Book of the Dead in 3D

Rita Lucarelli - Professor, MELC (Middle Eastern Languages and Cultures)

Status: Current Term Now Closed     Weekly Hours: 3-5 hrs     Location: On Campus

Ancient Egyptian coffins are inscribed with spells and images which stand in for spells. All function together as a machine to resurrect the deceased and to guide them safely through the next world. Given this function, it is perhaps surprising that the texts from coffins are usually published completely divorced...

 Digital Humanities and Data Science   Arts & Humanities

Identify elements of women’s omics profiles associated with menopausal status and time since menopause

Marisa Medina - Professor, UC San Francisco

Status: Full- no new appr needed     Weekly Hours: to be negotiated     Location: Off Campus

There are a limited number of human omics datasets that include menopausal status information for female subjects and include enough premenopausal and postmenopausal women. For instance, multi-omics data has been generated for thousands of Framingham Heart Study (FHS) participants and hundreds of TwinsUK female twin pairs. We will compare...

 Biological & Health Sciences   Digital Humanities and Data Science

Identify genetic and other factors associated with the trajectories of women’s LDL-cholesterol levels and blood pressure during the menopausal transition.

Marisa Medina - Professor, UC San Francisco

Status: Full- no new appr needed     Weekly Hours: to be negotiated     Location: Off Campus

A subset of women experience an accelerated rise in certain cardiometabolic risk factors around the time of menopause, increasing their risk for heart disease and other conditions. We would like to discover why some women experience dramatic changes while others are relatively protected...

 Biological & Health Sciences   Digital Humanities and Data Science

Classifying archaic ancestry in human genomes using machine learning models

Priya Moorjani - Professor, Center for Computational Biology, Molecular and Cell Biology

Status: Check back for status     Weekly Hours: 12 or more hours     Location: On Campus

Our lab studies human evolutionary genetics using genomic data from present-day and ancient DNA samples. We aim to understand how different populations relate to each other and what are some of the genes related to human adaptation and diseases. To this end, we develop computational and statistical methods and...

 Biological & Health Sciences   Digital Humanities and Data Science   Engineering, Design & Technologies   Mathematical and Physical Sciences

Investigate demographic changes in human evolutionary history through genetic analysis

Priya Moorjani - Professor, Center for Computational Biology, Molecular and Cell Biology

Status: Check back for status     Weekly Hours: 12 or more hours     Location: On Campus

Unraveling the first migrations of humans out of Africa has invoked great interest among researchers from a wide range of disciplines. With the advent of genome-wide DNA sequencing techniques and an increase in the availability of ancient samples, genetics offers important tools for testing different hypothesis related to human...

 Biological & Health Sciences   Digital Humanities and Data Science   Engineering, Design & Technologies   Mathematical and Physical Sciences

Deep Learning Methods for Fundamental Physics

Benjamin Nachman - Research Fellow, Berkeley Institute for Data Science (BIDS)

Status: Current Term Now Closed     Weekly Hours: to be negotiated     Location: Off Campus

This is an exciting time in fundamental physics: there are many experimental and theoretical hints for new phenomena (such as dark matter), yet we do not yet have any significant evidence for new particles or forces of nature since the discovery of the Higgs Boson in 2012. This could be...

 Mathematical and Physical Sciences   Digital Humanities and Data Science

Early stage research in Industrial Organization and Marketing

Olivia Natan - Professor, Business, Haas School

Status: Check back for status     Weekly Hours: to be negotiated     Location: Off Campus

This URAP project exposes students to one or more of the ongoing projects in quantitative marketing and industrial organization, including topics on product variety, pricing, and consumer demand. Examples of ongoing projects include work on optimal platform product variety, product bundling in video game markets, and consumer search and information...

 Digital Humanities and Data Science   Social Sciences

Ancient Texts, Modern Tools and Technologies

Laurie Pearce - Lecturer, Middle Eastern Languages and Cultures

Status: Full- no new appr needed     Weekly Hours: 3-5 hrs     Location: On Campus

PROJECT DESCRIPTION: Are you interested in ancient civilizations and modern technologies? Would you like to contribute to the preservation of knowledge and cultural heritage? Do you have or would you like to develop skills with databases and image preparation tools? Research apprentices associated with the URAP project Ancient Texts, Modern...

 Arts & Humanities   Digital Humanities and Data Science

Istanpolis: Reconstructing Greek Communities in 19th-20th century Istanbul

Christine Philliou - Professor, History

Status: Current Term Now Closed     Weekly Hours: to be negotiated     Location: On Campus

This is a collaborative research and Digital Humanities project I initiated in 2020 and our team includes scholars in Greece, Turkey, and several other countries. We are reading Ottoman Turkish and Greek sources about the population of Greek Orthodox in Istanbul and creating data sets, and then visualizations and interactive...

 Arts & Humanities   Digital Humanities and Data Science   Social Sciences

Advancing Neurodegenerative Disease Diagnosis with Artificial Intelligence

Pedro Pinheiro-Chagas - Professor, UC San Francisco

Status: Check back for status     Weekly Hours: to be negotiated     Location: Off Campus

The UCSF Memory and Aging Center (MAC) Co-pilot project is an innovative research initiative aimed at revolutionizing the diagnosis of neurodegenerative diseases (NDD), such as Alzheimer's disease and Frontotemporal dementia, through the integration of advanced Large Language Models (LLMs). This project is particularly significant due to the high prevalence...

 Biological & Health Sciences   Digital Humanities and Data Science

Advancing the detection of early dementia with digital speech markers

Pedro Pinheiro-Chagas - Professor, UC San Francisco

Status: Full- no new appr needed     Weekly Hours: to be negotiated     

Alzheimer’s disease and related dementias are neurodegenerative diseases with numbers rapidly increasing and currently no cure. To accurately identify the earliest signs of clinical dementia, there is a critical need for sensitive, low-cost, and high-access cognitive markers in the preclinical phase. Novel cognitive markers can complement biomarker information...

 Biological & Health Sciences   Digital Humanities and Data Science

Title: Predicting early neural functional alterations in neurodegeneration disorders

Pedro Pinheiro-Chagas - Professor, UC San Francisco

Status: Full- no new appr needed     Weekly Hours: to be negotiated     

Semantic dementia (SD) presents as a unique neurodegenerative disorder with focal atrophy of the anterior temporal lobes (ATLs). It is comprised of a primarily left-lateralized language syndrome and a right-lateralized behavioral disorder. One current challenge in this disease is in accurately identifying the distant brain regions that are...

 Biological & Health Sciences   Digital Humanities and Data Science

Circadian rhythms in malaria parasites: DNA motif and gene expression regulation

Filipa Rijo-Ferreira - Professor, Public Health

Status: Current Term Now Closed     Weekly Hours: 9-11 hrs     Location: On Campus

Earth rotation was an evolutionary pressure for organisms to evolve circadian rhythms in order to be able to anticipate the rhythmic day/night cycles. These circadian clocks regulate physiological properties such as sleep, immune response and metabolism. Our lab studies circadian clocks in parasites. This project focus on performing bioinformatics...

 Biological & Health Sciences   Digital Humanities and Data Science

Circadian Rhythms in malaria infection: uncovering the molecular clocks of parasites

Filipa Rijo-Ferreira - Professor, Public Health

Status: Full- no new appr needed     Weekly Hours: 9-11 hrs     

Parasitic diseases cause major health burden worldwide, with over 1 million deaths each year. Despite having the genome of many parasites sequenced, almost half of their genes are of unknown function. There are still major gaps in our understanding of host-parasite interactions and disease transmission by vectors. Our research...

 Biological & Health Sciences   Digital Humanities and Data Science

Circadian rhythms in malaria parasites: From mosquitos to mammalian cell culture.

Filipa Rijo-Ferreira - Professor, Public Health

Status: Full- no new appr needed     Weekly Hours: 9-11 hrs     Location: On Campus

The rotation of the Earth has exerted evolutionary pressure on organisms to develop circadian rhythms, enabling them to anticipate day/night cycles. These daily rhythms are observed across all life forms, regulating physiological functions such as sleep, immune response, and metabolism. Our lab focuses on studying circadian clocks in parasites...

 Biological & Health Sciences   Digital Humanities and Data Science

Sex specific determinants of C. elegans lifespan.

Veerle Rottiers - Professor, Nutritional Sciences and Toxicology

Status: Full- no new appr needed     Weekly Hours: 12 or more hours     Location: On Campus

Aging is a process of maturation and decline that affects all organisms. Understanding the conserved mechanisms of aging could lead to new strategies for the prevention of age-associated disease. Sex specific differences in longevity occur throughout the animal kingdom, including in humans. Those differences are proposed to be caused...

 Biological & Health Sciences   Digital Humanities and Data Science   Mathematical and Physical Sciences

Automated lifespan measurements using machine learning to study aging in the model organism C. elegans

Veerle Rottiers - Professor, Nutritional Sciences and Toxicology

Status: Full- no new appr needed     Weekly Hours: to be negotiated     

Aging affects all organisms. Understanding the conserved mechanisms of aging could lead to new strategies for the prevention and treatment of age-associated disease. C. elegans, a small roundworm, is one of the most widely used model organisms to study aging. Worms live for about 3 weeks making it practical...

 Biological & Health Sciences   Digital Humanities and Data Science   Mathematical and Physical Sciences

Human-AI Interfaces for the Future of Work (Research Track)

Park Sinchaisri - Professor, Business, Haas School

Status: Current Term Now Closed     Weekly Hours: 9-11 hrs     Location: On Campus

To be considered, please also complete this form: https://bit.ly/45sjUZw ] Our lab is currently working on multiple research projects of various stages on human-AI interfaces for a variety of applications in the future of work. The overarching goals are to (i) understand how humans learn and make decisions...

 Digital Humanities and Data Science   Social Sciences   Mathematical and Physical Sciences   Engineering, Design & Technologies

Human-AI Interfaces for the Future of Work (Game-Building Track)

Park Sinchaisri - Professor, Business, Haas School

Status: Current Term Now Closed     Weekly Hours: 9-11 hrs     Location: On Campus

To be considered, please also complete this form: https://bit.ly/45sjUZw ] Our lab is currently working on multiple research projects of various stages on human-AI interfaces for a variety of applications in the future of work. The overarching goals are to (i) understand how humans learn and make decisions...

 Digital Humanities and Data Science   Social Sciences   Mathematical and Physical Sciences   Engineering, Design & Technologies

Human-AI Interfaces for the Future of Work (Foundational Track)

Park Sinchaisri - Professor, Business, Haas School

Status: Current Term Now Closed     Weekly Hours: 9-11 hrs     Location: On Campus

To be considered, please also complete this form: https://bit.ly/45sjUZw ] Our lab is currently working on multiple research projects of various stages on human-AI interfaces for a variety of applications in the future of work. The overarching goals are to (i) understand how humans learn and make decisions...

 Digital Humanities and Data Science   Social Sciences   Mathematical and Physical Sciences   Engineering, Design & Technologies

Radiological Data Science and Clinical Research (lung cancer imaging and intervention clinical/data science research, radiological large language model, clinical AI validation, novel imaging modality 0.55T lung MRI clinical translation)

Jae Ho Sohn - Professor, UC San Francisco

Status: Full- no new appr needed     Weekly Hours: 6-8 hrs     Location: Off Campus

Radiologists are doctors who specialize in extracting clinically useful information from medical images (such as CT, chest X-ray, and MRIs) and communicating these findings with other doctors. We leverage abstract clinical reasoning and visual pattern recognition skills to extract hidden information in the images that may be important for...

 Biological & Health Sciences   Digital Humanities and Data Science

Analyzing the robustness of automated evaluation metrics for medical information extraction with generative LLMs

Madhumita Sushil - Professor, UC San Francisco

Status: Full- no new appr needed     Weekly Hours: 9-11 hrs     Location: Off Campus

LLMs have demonstrated tremendous potential in various domains, including healthcare. However, evaluating their outputs, especially in clinical settings, presents unique challenges. This project will compare the evaluation metrics obtained from automated methods for assessing free-text outputs generated by LLMs with the assessments from expert clinical judgment. The findings will...

 Digital Humanities and Data Science   Biological & Health Sciences

Facebook for Vikings: Social Networks and the Icelandic Sagas

Timothy Tangherlini - Professor, Scandinavian

Status: Current Term Now Closed     Weekly Hours: 6-8 hrs     Location: On Campus

The Icelandic Family Sagas are an intriguing window onto the social world of 10th and 11th century Iceland, seen through the authorial lens of late medieval writers. A striking characteristic of the sagas is the abundance of characters that interact in and across complex social networks as they first initiate...

 Arts & Humanities   Social Sciences   Digital Humanities and Data Science

The Digital Berkeley Folklore Archive

Timothy Tangherlini - Professor, Scandinavian

Status: Current Term Now Closed     Weekly Hours: to be negotiated     Location: On Campus

The Berkeley folklore archive is one of the largest, student-created folklore archives in North America. Started in the 1960s, the archive houses over 500,000 records detailing the everyday life and informal culture of thousands of students and their communities. In 2020, the archive began digitizing these records. Along with...

 Arts & Humanities   Social Sciences   Digital Humanities and Data Science

Using Cellphone Data to Measure Commuting Patterns in Lagos, Nigeria

Nick Tsivanidis - Professor, Business, Haas School

Status: Check back for status     Weekly Hours: 9-11 hrs     Location: On Campus

As part of a larger project on the impacts of new bus and rail in Lagos, our team is looking for a research assistant to help manage, clean and analyze cellphone metadata being shared with us by a large telco in Nigeria. The work is a 3 way partnership between...

 Social Sciences   Digital Humanities and Data Science

Building Demonstration of Algorithmic Pricing based on Data

Eric Van Dusen - Lecturer, Data Science Undergraduate Studies

Status: Current Term Now Closed     Weekly Hours: 6-8 hrs     Location: On Campus

Research and help to develop a data-driven example of algorithmic pricing. This could be from online, from another author, or scraping information. There are many policy implications of algorithmic priceing, in ride-share and delivery, in housing rental markets, and on Amazon. This project is to develop a hands...

 Digital Humanities and Data Science   Engineering, Design & Technologies

Dashboard Development for JupyterHealth Platform

Maryam Vareth - Researcher, Berkeley Institute for Data Science (BIDS)

Status: Current Term Now Closed     Weekly Hours: 9-11 hrs     Location: On Campus

Our project focuses on developing a clinician-facing platform designed to enhance the lives of individuals with diabetes and hypertension. By integrating real-time continuous glucose monitoring (CGM) and blood pressure (BP) data into a dynamic, interactive dashboard, we empower healthcare professionals with comprehensive insights into patient health, enabling more...

 Engineering, Design & Technologies   Digital Humanities and Data Science   Biological & Health Sciences

Housing Stock - Automated building layouts for sustainable cities

Ramon Weber - Professor , Architecture

Status: Current Term Now Closed     Weekly Hours: to be negotiated     Location: On Campus

The UN predicts a doubling of floor area until 2050, estimating a fantastic 230 billion square meters of buildings to be built in the next decades. Meanwhile, buildings should drastically lower their carbon emissions and energy use in order to avoid climate disasters. The project tackles this question with a...

 Engineering, Design & Technologies   Digital Humanities and Data Science

Title Unavailable

Ramon Weber - Professor , Architecture

Status: Check back for status     

...

 Engineering, Design & Technologies   Digital Humanities and Data Science

Data Access and Visualization for the Dark Energy Spectroscopic Instrument

Martin White - Professor, Physics

Status: Full- no new appr needed     Weekly Hours: to be negotiated     Location: Off Campus

The Dark Energy Spectroscopic Instrument (DESI, https://desi.lbl.gov) is making the world's largest 3D map of the universe. In this project you will help us develop web-based data access, visualization, and analysis tools for use by thousands of scientists worldwide...

 Mathematical and Physical Sciences   Digital Humanities and Data Science

Cosmology Data Analysis for the Dark Energy Spectroscopic Instrument

Martin White - Professor, Physics

Status: Current Term Now Closed     Weekly Hours: to be negotiated     Location: Off Campus

The Dark Energy Spectroscopic Instrument (DESI) survey is measuring the expansion history of our universe with unprecedented precision. By measuring the light from tens of millions of extragalactic objects, the DESI team aims to understand the nature of dark energy and how it has shaped our universe. Critical to DESI’s...

 Mathematical and Physical Sciences   Digital Humanities and Data Science

Individual differences in face perception.

David Whitney - Professor, Psychology

Status: Full- no new appr needed     Weekly Hours: to be negotiated     Location: On Campus

The human perceptual system processes faces in an unique manner. Humans perceive faces holistically (i.e. as a whole) rather than as a set of separate features. The face inversion effect is one of the most compelling pieces of evidence for holistic processing of faces. Upright faces are identified faster than...

 Social Sciences   Digital Humanities and Data Science   Education, Cognition & Psychology

Eye movement behavior during autonomous vehicle-human interaction.

David Whitney - Professor, Psychology

Status: Full- no new appr needed     Weekly Hours: to be negotiated     Location: On Campus

The recent advent of autonomous vehicles (AV) in the last decade has changed the traditional role of drivers. Currently, autonomous cars being developed and commercialized are not fully autonomous. In fact, commercially-available AV take control of only some of the driving functions, such as speed, or are highly automated...

 Social Sciences   Digital Humanities and Data Science   Education, Cognition & Psychology

How do we register the flow of time in natural movies?

David Whitney - Professor, Psychology

Status: Full- no new appr needed     Weekly Hours: 6-8 hrs     Location: On Campus

Accurately knowing the timing of different events happening around us is a crucial ability of all human beings. In natural scenes such as movies or everyday life, dynamic events could happen either in the left or right visual field. Given that information coming through our left visual field will be...

 Social Sciences   Digital Humanities and Data Science   Education, Cognition & Psychology

Investigating Human Emotion Perception.

David Whitney - Professor, Psychology

Status: Check back for status     Weekly Hours: 9-11 hrs     Location: On Campus

The ability to quickly and accurately perceive emotion is essential in our daily lives. However, how does the brain process multiple sources of emotional information when making emotional judgments? The brain must take into consideration facial expression, tone of voice, body movement, contextual information, and even beliefs in its judgment...

 Social Sciences   Digital Humanities and Data Science   Education, Cognition & Psychology

Building Partnerships for Participatory, Collaborative and Community Mapping

Clancy Wilmott - Professor, Geography

Status: Current Term Now Closed     Weekly Hours: to be negotiated     Location: On Campus

This project builds partnerships between community groups and academic researchers at studio.geo-?, an experimental mapping studio hosted out of the Department of Geography + the Berkeley Centre for New Media. It connects people and organisations who need cartographic assistance, from simple technical advice, access to geographic data + other resources to community...

 Engineering, Design & Technologies   Digital Humanities and Data Science

Maps, Films, and Research: Pacific Perspectives and American Presence

Clancy Wilmott - Professor, Geography

Status: Full- no new appr needed     Weekly Hours: to be negotiated     Location: On Campus

In partnership with a wide range of Pacific-based organizations including Fåha’ Digital Media, Pacific Islanders in Communication, the Northern Marianas Humanities Council, and Blue Ocean Law, this wide-ranging research consists of two central projects: - Researching, compiling and mapping films about Pacific Islander stories, made by or in partnership...

 Engineering, Design & Technologies   Digital Humanities and Data Science

Navigating the Garden: Researching Wayfinding and Mapping in Botanic Gardens

Clancy Wilmott - Professor, Geography

Status: Full- no new appr needed     Weekly Hours: to be negotiated     Location: On Campus

This project is in collaboration with the UC Berkeley Botanic Gardens. It focuses on the use of signage and interpretive materials within the Crops of the World garden (and the gardens more broadly), with specific focus on geographical, cartographical and decolonial frameworks. It would suit an undergraduate student with interests...

 Engineering, Design & Technologies   Digital Humanities and Data Science

State of Mind: Understanding State Secessionist Movements in Context

Clancy Wilmott - Professor, Geography

Status: Full- no new appr needed     Weekly Hours: 3-5 hrs     Location: On Campus

General Description The breaking apart of the American state is as old as the concept of the United States itself. This project seeks to document the scale of state secessionist movements through time using primary and secondary sources. The broader context of this project is a study of the co...

 Engineering, Design & Technologies   Digital Humanities and Data Science

Critical Reasoning for College Readiness: An assessment development project in computational thinking

Mark Wilson - Professor, Education

Status: Current Term Now Closed     Weekly Hours: 6-8 hrs     Location: On Campus

Critical Reasoning for College Readiness (CR4CR) is a project that seeks to develop psychometrically sound assessments that can be used by teachers in the classrooms at the high school and early college levels. Our goal is to develop, revise, and validate a suite of assessments, including unique assessment tasks and...

 Education, Cognition & Psychology   Social Sciences   Digital Humanities and Data Science

Improving the data-analysis pipeline of the COSI space mission with machine learning and more

Andreas Zoglauer - Staff Researcher, Space Sciences Laboratory

Status: Current Term Now Closed     Weekly Hours: 9-11 hrs     Location: On Campus

COSI, the Compton Spectrometer and Imager, is a NASA-funded gamma-ray telescope which is currently under development and scheduled for launch in 2027. It will observe Galactic nucleosynthesis and positron annihilation, as well as the most violent events in our Universe (supernovae, neutron star mergers) and the most extreme...

 Engineering, Design & Technologies   Mathematical and Physical Sciences   Digital Humanities and Data Science

GAPS Antarctic Balloon Payload to Probe Dark Matter Using Galactic Particle Signatures

Andreas Zoglauer - Staff Researcher, Space Sciences Laboratory

Status: Full- no new appr needed     Weekly Hours: 9-11 hrs     Location: On Campus

The General Antiparticle Spectrometer (GAPS) is a NASA high-altitude balloon mission designed to detect messengers of dark matter interactions in the galaxy. Apprentices are needed to participate in development and testing of both hardware and online software as GAPS prepares for a December 2024 launch from Antarctica. GAPS is...

 Engineering, Design & Technologies   Mathematical and Physical Sciences   Digital Humanities and Data Science

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